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Books (1): | |
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, Chapelle O
 , and Weston J : Large-Scale Kernel Machines, 416, MIT Press, Cambridge, MA, USA, (2007).
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Articles (9): | |
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Sonnenburg S , , Ong CS , , , , , Müller K-R , , Rasmussen CE , Rätsch G , Schölkopf B , , , Weston J and (2007) The Need for Open Source Software in Machine Learning
Journal of Machine Learning Research 8 2443-2466.
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, Sinz F , Weston J and (2006) Large Scale Transductive SVMs
Journal of Machine Learning Research 7 1687-1712.
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Weston J , , , Zhou D , and (2005) Semi-supervised protein classification using cluster kernels
Bioinformatics 21(15) 3241-3247. |
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Lal TN , Schröder M , , Weston J , , and Schölkopf B (2004) Support Vector Channel Selection in BCI
IEEE Transactions on Biomedical Engineering 51(6) 1003-1010.
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Weston J , Elisseeff A , Zhou D , and (2004) Protein ranking: from local to global structure in the protein similarity network
Proceedings of the National Academy of Science 101(17) 6559-6563.
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Weston J , Schölkopf B , , and (2003) Dealing with large Diagonals in Kernel Matrices
Annals of the Institute of Statistical Mathematics 55(2) 391-408.
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, Rätsch G , Weston J , Schölkopf B , and Müller K-R (2003) Constructing Descriptive and Discriminative Non-linear Features: Rayleigh Coefficients in Kernel Feature Spaces
IEEE Transactions on Pattern Analysis and Machine Intelligence 25(5) 623-628.
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Weston J , , Bousquet O , Chapelle O , Elisseeff A and Schölkopf B (2003) Feature selection and transduction for prediction of molecular bioactivity for drug design
Bioinformatics 19(6) 764-771.
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Weston J , Elisseeff A , Schölkopf B and (2003) Use of the Zero-Norm with Linear Models and Kernel Methods
Journal of Machine Learning Research 3 1439-1461.
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Conference papers (19): | |
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Weston J , , Sinz F , and Vapnik V (2006) Inference with the Universum
In: ICML 2006, (Ed) Cohen, W. W., A. Moore, 23rd International Conference on Machine Learning, ACM Press, New York, NY, USA, 1009-1016.
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, Sinz F , Weston J and (2006) Trading Convexity for Scalability
In: ICML 2006, (Ed) Cohen, W. W., A. Moore, 23rd International Conference on Machine Learning, ACM Press, New York, NY, USA, 201-208.
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Bakir GH , and Weston J (2005) Breaking SVM Complexity with Cross-Training
In: Advances in Neural Information Processing Systems 17, (Ed) Saul, L.K. , Y. Weiss, L. Bottou, Eighteenth Annual Conference on Neural Information Processing Systems (NIPS 2004), MIT Press, Cambridge, MA, USA, 81-88.
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Weston J , Schölkopf B and Bousquet O (2005) Joint Kernel Maps
In: Proceedings of the 8th InternationalWork-Conference on Artificial Neural Networks, (Ed) , and , IWANN 2005, Springer-Verlag, Berlin Heidelberg, Germany, LNCS 3512, 176-191.
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Bakir GH , Weston J and Schölkopf B (2004) Learning to Find Pre-Images
In: Advances in Neural Information Processing Systems 16, (Ed) , and , 17th Annual Conference on Neural Information Processing Systems (NIPS 2003), MIT Press, Cambridge, MA, USA, 449-456.
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Zhou D , Bousquet O , Lal TN , Weston J and Schölkopf B (2004) Learning with Local and Global Consistency
In: Advances in Neural Information Processing Systems 16, (Ed) , and , 17th Annual Conference on Neural Information Processing Systems (NIPS 2003), MIT Press, Cambridge, MA, USA, 321-328.
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Eichhorn J , Tolias AS , Zien A , Kuss M , Rasmussen CE , Weston J , Logothetis NK and Schölkopf B (2004) Prediction on Spike Data Using Kernel Algorithms
In: Advances in Neural Information Processing Systems 16, (Ed) , and , 17th Annual Conference on Neural Information Processing Systems (NIPS 2003), MIT Press, Cambridge, MA, USA, 1367-1374.
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Zhou D , Weston J , Gretton A , Bousquet O and Schölkopf B (2004) Ranking on Data Manifolds
In: Advances in neural information processing systems 16, (Ed) , and , 17th Annual Conference on Neural Information Processing Systems (NIPS 2003), MIT Press, Cambridge, MA, USA, 169-176.
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Weston J , , Zhou D , and (2004) Semi-Supervised Protein Classification using Cluster Kernels
In: Advances in Neural Information Processing Systems 16, (Ed) Thrun, S., L.K. Saul, B. Schölkopf, Seventeenth Annual Conference on Neural Information Processing Systems (NIPS 2003), MIT Press, Cambridge, MA, USA, 595-602.
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Chapelle O , Weston J and Schölkopf B (2003) Cluster Kernels for Semi-Supervised Learning
In: Advances in Neural Information Processing Systems 15, (Ed) , and , 16th Annual Conference on Neural Information Processing Systems (NIPS 2002), MIT Press, Cambridge, MA, USA, 585-592.
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Weston J , Chapelle O , Elisseeff A , Schölkopf B and Vapnik V (2003) Kernel Dependency Estimation
In: Advances in Neural Information Processing Systems 15, (Ed) , and , 16th Annual Conference on Neural Information Processing Systems (NIPS 2002), MIT Press, Cambridge, MA, USA, 873-880.
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, , Weston J and (2003) Mismatch String Kernels for SVM Protein Classification
In: Advances in Neural Information Processing Systems 15, (Ed) Becker, S. , S. Thrun, K. Obermayer, Sixteenth Annual Conference on Neural Information Processing Systems (NIPS 2002), MIT Press, Cambridge, MA, USA, 1417-1424.
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Chapelle O , Schölkopf B and Weston J (2003) Semi-Supervised Learning through Principal Directions Estimation
ICML 2003 Workshop: The Continuum from Labeled to Unlabeled Data in Machine Learning & Data Mining, 7 pages.
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Schölkopf B , Weston J , , and (2002) A kernel approach for learning from almost orthogonal patterns
In: Principles of Data Mining and Knowledge Discovery, Lecture Notes in Computer Science, (Ed) , and , 13th European Conference on Machine Learning (ECML 2002) and 6th European Conference on Principles and Practice of Knowledge Discovery in Databases (PKDD'2002), Springer, Berlin, Germany, 2430/2431, 511-528.
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Weston J , , Chapelle O , , and (2001) Feature Selection for SVMs
In: Advances in Neural Information Processing Systems 13, (Ed) Leen, T.K. , T.G. Dietterich, V. Tresp, Fourteenth Annual Neural Information Processing Systems Conference (NIPS 2000), MIT Press, Cambridge, MA, USA, 668-674.
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Chapelle O , Weston J , and (2001) Vicinal Risk Minimization
In: Advances in Neural Information Processing Systems 13, (Ed) Leen, T.K. , T.G. Dietterich, V. Tresp, Fourteenth Annual Neural Information Processing Systems Conference (NIPS 2000), MIT Press, Cambridge, MA, USA, 416-422.
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, Rätsch G , Weston J , Schölkopf B , and (2000) Invariant feature extraction and classification in kernel spaces
In: Advances in neural information processing systems 12, (Ed) , and , 13th Annual Neural Information Processing Systems Conference (NIPS 1999), MIT Press, Cambridge, MA, USA, 526-532.
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Chapelle O , and Weston J (2000) Transductive Inference for Estimating Values of Functions
In: Advances in Neural Information Processing Systems 12, (Ed) Solla, S.A. , T.K. Leen, K-R Müller, Thirteenth Annual Neural Information Processing Systems Conference (NIPS 1999), MIT Press, Cambridge, MA, USA, 421-427.
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, Rätsch G , Weston J , Schölkopf B and (1999) Fisher discriminant analysis with kernels
In: Proceedings of the 1999 IEEE Signal Processing Society Workshop, (Ed) , , and , Neural Networks for Signal Processing IX, IEEE, 9, 41-48.
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Contributions to books (6): | |
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Weston J , Bakir GH , Bousquet O , , and Schölkopf B : Joint Kernel Maps, 67-84.
In: Predicting Structured Data, (Ed) , , , , and , MIT Press, Cambridge, MA, USA, (2007).
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, Sinz F , Weston J and : Trading Convexity for Scalability, 275-300.
In: Large Scale Kernel Machines, (Ed) Bottou, L. , O. Chapelle, D. DeCoste, J. Weston, MIT Press, Cambridge, MA, USA, (2007).
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BakIr G , Schölkopf B and Weston J : On the Pre-Image Problem in Kernel Methods, 284-302.
In: Kernel Methods in Bioengineering, Signal and Image Processing, (Ed) , and , Idea Group Publishing, Hershey, PA, USA, (2007).
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Lal TN , Chapelle O , Weston J and Elisseeff A : Embedded methods, 137-165.
In: Feature Extraction: Foundations and Applications, (Ed) Guyon, I. , S. Gunn, M. Nikravesh, L. A. Zadeh, Springer, Berlin, Germany, (2006).
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, Weston J , Herrmann DJL and Schölkopf B : Extension of the nu-SVM range for classification, 179-196.
In: Advances in Learning Theory: Methods, Models and Applications, NATO Science Series III: Computer and Systems Sciences, Vol. 190, (Ed) , , , and , IOS Press, Amsterdam, (2003). |
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Schölkopf B , and Weston J : Statistical Learning and Kernel Methods in Bioinformatics, 1-21.
In: Artificial Intelligence and Heuristic Methods in Bioinformatics, (Ed) P Frasconi und R Shamir, IOS Press, Amsterdam, The Netherlands, (2003). |
Technical reports (12): | |
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Weston J and Bakir GH : Fast Binary and Multi-Output Reduced Set Selection, 132, (2004).
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Weston J , Schölkopf B , Bousquet O , and : Joint Kernel Maps, 131, Max-Planck-Institute for Biological Cybernetics, Tübingen, (2004).
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Lal TN , Schröder M , , Weston J , , and Schölkopf B : Support Vector Channel Selection in BCI, 120, Max Planck Institute for Biological Cybernetics, Tuebingen, Germany, (2003).
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Zhou D , Bousquet O , Lal TN , Weston J and Schölkopf B : Learning with Local and Global Consistency, 112, Max Planck Institute for Biological Cybernetics, Tuebingen, Germany, (2003).
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Weston J , , and : Machine Learning approaches to protein ranking: discriminative, semi-supervised, scalable algorithms, 111, MPI, Tuebingen, (2003).
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Zhou D , Weston J , Gretton A , Bousquet O and Schölkopf B : Ranking on Data Manifolds, 113, Max Planck Institute for Biological Cybernetics, 72076 Tuebingen, Germany, (2003).
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Weston J , Chapelle O , Elisseeff A , Schölkopf B and : Kernel Dependency Estimation, 98, Max Planck Institute for Biological Cybernetics, (2002).
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Weston J , , Bousquet O , Chapelle O , Elisseeff A and Schölkopf B : Feature Selection and Transduction for Prediction of Molecular Bioactivity for Drug Design, (2002).
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Weston J , Chapelle O and : Data cleaning algorithms with applications to micro-array experiments, Biowulf, (2001).
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Weston J , , Bousquet O , Chapelle O , Elisseeff A and Schölkopf B : KDD Cup 2001 data analysis: prediction of molecular bioactivity for drug design -- Binding to Thrombin, BIOwulf, (2001).
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Weston J , Elisseeff A and Schölkopf B : Use of the $ell_0$-norm with linear models and kernel methods, Biowulf Technologies, (2001).
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, , Weston J , , Schölkopf B and : Support Vector Machine Reference Manual, CSD-TR-98-03, Department of Computer Science, Royal Holloway, University of London, (1998).
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