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Jason Weston, Ph.D.

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Jason Weston

Position: Research Scientist  Unit: Alumni Schölkopf

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Books (1):

Bottou L , Chapelle O Person, DeCoste D and Weston J Person: Large-Scale Kernel Machines, 416, MIT Press, Cambridge, MA, USA, (2007).

Articles (9):

Sonnenburg S Person, Braun ML , Ong CS Person, Bengio S , Bottou L , Holmes G , LeCun Y , Müller K-R Person, Pereira F , Rasmussen CE Person, Rätsch G Person, Schölkopf B Person, Smola A , Vincent P , Weston J Person and Williamson RC (2007) The Need for Open Source Software in Machine Learning Journal of Machine Learning Research 8 2443-2466.
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Collobert R , Sinz F Person, Weston J Person and Bottou L (2006) Large Scale Transductive SVMs Journal of Machine Learning Research 7 1687-1712.
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Weston J Person, Leslie CS , Ie E , Zhou D Person, Elisseeff A and Noble WS (2005) Semi-supervised protein classification using cluster kernels Bioinformatics 21(15) 3241-3247.
Lal TN Person, Schröder M Person, Hinterberger T , Weston J Person, Bogdan M , Birbaumer N and Schölkopf B Person (2004) Support Vector Channel Selection in BCI IEEE Transactions on Biomedical Engineering 51(6) 1003-1010.
Weston J Person, Elisseeff A Person, Zhou D Person, Leslie C and Noble WS (2004) Protein ranking: from local to global structure in the protein similarity network Proceedings of the National Academy of Science 101(17) 6559-6563.
Weston J Person, Schölkopf B Person, Eskin E , Leslie C and Noble WS (2003) Dealing with large Diagonals in Kernel Matrices Annals of the Institute of Statistical Mathematics 55(2) 391-408.
Mika S , Rätsch G Person, Weston J Person, Schölkopf B Person, Smola AJ and Müller K-R Person (2003) Constructing Descriptive and Discriminative Non-linear Features: Rayleigh Coefficients in Kernel Feature Spaces IEEE Transactions on Pattern Analysis and Machine Intelligence 25(5) 623-628.
Weston J Person, Perez-Cruz F , Bousquet O Person, Chapelle O Person, Elisseeff A Person and Schölkopf B Person (2003) Feature selection and transduction for prediction of molecular bioactivity for drug design Bioinformatics 19(6) 764-771.
Weston J Person, Elisseeff A Person, Schölkopf B Person and Tipping M (2003) Use of the Zero-Norm with Linear Models and Kernel Methods Journal of Machine Learning Research 3 1439-1461.
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Conference papers (19):

Weston J Person, Collobert R , Sinz F Person, Bottou L and Vapnik V Person (2006) Inference with the Universum In: ICML 2006, (Ed) Cohen, W. W., A. Moore, 23rd International Conference on Machine Learning, ACM Press, New York, NY, USA, 1009-1016.
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Collobert R , Sinz F Person, Weston J Person and Bottou L (2006) Trading Convexity for Scalability In: ICML 2006, (Ed) Cohen, W. W., A. Moore, 23rd International Conference on Machine Learning, ACM Press, New York, NY, USA, 201-208.
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Bakir GH Person, Bottou L and Weston J Person (2005) Breaking SVM Complexity with Cross-Training In: Advances in Neural Information Processing Systems 17, (Ed) Saul, L.K. , Y. Weiss, L. Bottou, Eighteenth Annual Conference on Neural Information Processing Systems (NIPS 2004), MIT Press, Cambridge, MA, USA, 81-88.
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Weston J Person, Schölkopf B Person and Bousquet O Person (2005) Joint Kernel Maps In: Proceedings of the 8th InternationalWork-Conference on Artificial Neural Networks, (Ed) J Cabestany, A Prieto and F Sandoval, IWANN 2005, Springer-Verlag, Berlin Heidelberg, Germany, LNCS 3512, 176-191.
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Bakir GH Person, Weston J Person and Schölkopf B Person (2004) Learning to Find Pre-Images In: Advances in Neural Information Processing Systems 16, (Ed) S Thrun, LK Saul and B Schölkopf, 17th Annual Conference on Neural Information Processing Systems (NIPS 2003), MIT Press, Cambridge, MA, USA, 449-456.
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Zhou D Person, Bousquet O Person, Lal TN Person, Weston J Person and Schölkopf B Person (2004) Learning with Local and Global Consistency In: Advances in Neural Information Processing Systems 16, (Ed) S Thrun, LK Saul and B Schölkopf, 17th Annual Conference on Neural Information Processing Systems (NIPS 2003), MIT Press, Cambridge, MA, USA, 321-328.
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Eichhorn J Person, Tolias AS Person, Zien A Person, Kuss M Person, Rasmussen CE Person, Weston J Person, Logothetis NK Person and Schölkopf B Person (2004) Prediction on Spike Data Using Kernel Algorithms In: Advances in Neural Information Processing Systems 16, (Ed) S Thrun, LK Saul and B Schölkopf, 17th Annual Conference on Neural Information Processing Systems (NIPS 2003), MIT Press, Cambridge, MA, USA, 1367-1374.
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Zhou D Person, Weston J Person, Gretton A Person, Bousquet O Person and Schölkopf B Person (2004) Ranking on Data Manifolds In: Advances in neural information processing systems 16, (Ed) S Thrun, L Saul and B Schölkopf, 17th Annual Conference on Neural Information Processing Systems (NIPS 2003), MIT Press, Cambridge, MA, USA, 169-176.
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Weston J Person, Leslie C , Zhou D Person, Elisseeff A and Noble WS (2004) Semi-Supervised Protein Classification using Cluster Kernels In: Advances in Neural Information Processing Systems 16, (Ed) Thrun, S., L.K. Saul, B. Schölkopf, Seventeenth Annual Conference on Neural Information Processing Systems (NIPS 2003), MIT Press, Cambridge, MA, USA, 595-602.
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Chapelle O Person, Weston J Person and Schölkopf B Person (2003) Cluster Kernels for Semi-Supervised Learning In: Advances in Neural Information Processing Systems 15, (Ed) S Becker, S Thrun and K Obermayer, 16th Annual Conference on Neural Information Processing Systems (NIPS 2002), MIT Press, Cambridge, MA, USA, 585-592.
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Weston J Person, Chapelle O Person, Elisseeff A Person, Schölkopf B Person and Vapnik V Person (2003) Kernel Dependency Estimation In: Advances in Neural Information Processing Systems 15, (Ed) S Becker, S Thrun and K Obermayer, 16th Annual Conference on Neural Information Processing Systems (NIPS 2002), MIT Press, Cambridge, MA, USA, 873-880.
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Leslie C , Eskin E , Weston J Person and Noble WS (2003) Mismatch String Kernels for SVM Protein Classification In: Advances in Neural Information Processing Systems 15, (Ed) Becker, S. , S. Thrun, K. Obermayer, Sixteenth Annual Conference on Neural Information Processing Systems (NIPS 2002), MIT Press, Cambridge, MA, USA, 1417-1424.
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Chapelle O Person, Schölkopf B Person and Weston J Person (2003) Semi-Supervised Learning through Principal Directions Estimation ICML 2003 Workshop: The Continuum from Labeled to Unlabeled Data in Machine Learning & Data Mining, 7 pages.
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Schölkopf B Person, Weston J Person, Eskin E , Leslie C and Noble WS (2002) A kernel approach for learning from almost orthogonal patterns In: Principles of Data Mining and Knowledge Discovery, Lecture Notes in Computer Science, (Ed) T Elomaa, H Mannila and H Toivonen, 13th European Conference on Machine Learning (ECML 2002) and 6th European Conference on Principles and Practice of Knowledge Discovery in Databases (PKDD'2002), Springer, Berlin, Germany, 2430/2431, 511-528.
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Weston J Person, Mukherjee S , Chapelle O Person, Pontil M , Poggio T and Vapnik V (2001) Feature Selection for SVMs In: Advances in Neural Information Processing Systems 13, (Ed) Leen, T.K. , T.G. Dietterich, V. Tresp, Fourteenth Annual Neural Information Processing Systems Conference (NIPS 2000), MIT Press, Cambridge, MA, USA, 668-674.
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Chapelle O Person, Weston J Person, Bottou L and Vapnik V (2001) Vicinal Risk Minimization In: Advances in Neural Information Processing Systems 13, (Ed) Leen, T.K. , T.G. Dietterich, V. Tresp, Fourteenth Annual Neural Information Processing Systems Conference (NIPS 2000), MIT Press, Cambridge, MA, USA, 416-422.
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Mika S , Rätsch G Person, Weston J Person, Schölkopf B Person, Smola AJ and Müller K-R (2000) Invariant feature extraction and classification in kernel spaces In: Advances in neural information processing systems 12, (Ed) SA Solla, TK Leen and K-R Müller, 13th Annual Neural Information Processing Systems Conference (NIPS 1999), MIT Press, Cambridge, MA, USA, 526-532.
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Chapelle O Person, Vapnik V and Weston J Person (2000) Transductive Inference for Estimating Values of Functions In: Advances in Neural Information Processing Systems 12, (Ed) Solla, S.A. , T.K. Leen, K-R Müller, Thirteenth Annual Neural Information Processing Systems Conference (NIPS 1999), MIT Press, Cambridge, MA, USA, 421-427.
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Mika S , Rätsch G Person, Weston J Person, Schölkopf B Person and Müller K-R (1999) Fisher discriminant analysis with kernels In: Proceedings of the 1999 IEEE Signal Processing Society Workshop, (Ed) Y-H Hu, J Larsen, E Wilson and S Douglas, Neural Networks for Signal Processing IX, IEEE, 9, 41-48.

Contributions to books (6):

Weston J Person, Bakir GH Person, Bousquet O Person, Mann T , Noble WS and Schölkopf B Person: Joint Kernel Maps, 67-84. In: Predicting Structured Data, (Ed) GH Bakir, T Hofmann, B Schölkopf, AJ Smola, B Taskar and SVN Vishwanathan, MIT Press, Cambridge, MA, USA, (2007).
Collobert R , Sinz F Person, Weston J Person and Bottou L : Trading Convexity for Scalability, 275-300. In: Large Scale Kernel Machines, (Ed) Bottou, L. , O. Chapelle, D. DeCoste, J. Weston, MIT Press, Cambridge, MA, USA, (2007).
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BakIr G Person, Schölkopf B Person and Weston J Person: On the Pre-Image Problem in Kernel Methods, 284-302. In: Kernel Methods in Bioengineering, Signal and Image Processing, (Ed) G Camps-Valls, JL Rojo-Álvarez and M Martínez-Ramón, Idea Group Publishing, Hershey, PA, USA, (2007).
Lal TN Person, Chapelle O Person, Weston J Person and Elisseeff A Person: Embedded methods, 137-165. In: Feature Extraction: Foundations and Applications, (Ed) Guyon, I. , S. Gunn, M. Nikravesh, L. A. Zadeh, Springer, Berlin, Germany, (2006).
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Perez-Cruz F , Weston J Person, Herrmann DJL Person and Schölkopf B Person: Extension of the nu-SVM range for classification, 179-196. In: Advances in Learning Theory: Methods, Models and Applications, NATO Science Series III: Computer and Systems Sciences, Vol. 190, (Ed) J Suykens, G Horvath, S Basu, C Micchelli and J Vandewalle, IOS Press, Amsterdam, (2003).
Schölkopf B Person, Guyon I and Weston J Person: Statistical Learning and Kernel Methods in Bioinformatics, 1-21. In: Artificial Intelligence and Heuristic Methods in Bioinformatics, (Ed) P Frasconi und R Shamir, IOS Press, Amsterdam, The Netherlands, (2003).

Technical reports (12):

Weston J Person and Bakir GH Person: Fast Binary and Multi-Output Reduced Set Selection, 132, (2004).
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Weston J Person, Schölkopf B Person, Bousquet O Person, Mann and Noble WS : Joint Kernel Maps, 131, Max-Planck-Institute for Biological Cybernetics, Tübingen, (2004).
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Lal TN Person, Schröder M Person, Hinterberger T , Weston J Person, Bogdan M , Birbaumer N and Schölkopf B Person: Support Vector Channel Selection in BCI, 120, Max Planck Institute for Biological Cybernetics, Tuebingen, Germany, (2003).
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Zhou D Person, Bousquet O Person, Lal TN Person, Weston J Person and Schölkopf B Person: Learning with Local and Global Consistency, 112, Max Planck Institute for Biological Cybernetics, Tuebingen, Germany, (2003).
Weston J Person, Leslie C , Elisseeff A and Noble WS : Machine Learning approaches to protein ranking: discriminative, semi-supervised, scalable algorithms, 111, MPI, Tuebingen, (2003).
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Zhou D Person, Weston J Person, Gretton A Person, Bousquet O Person and Schölkopf B Person: Ranking on Data Manifolds, 113, Max Planck Institute for Biological Cybernetics, 72076 Tuebingen, Germany, (2003).
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Weston J Person, Chapelle O Person, Elisseeff A Person, Schölkopf B Person and Vapnik V : Kernel Dependency Estimation, 98, Max Planck Institute for Biological Cybernetics, (2002).
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Weston J Person, Perez-Cruz F , Bousquet O Person, Chapelle O Person, Elisseeff A Person and Schölkopf B Person: Feature Selection and Transduction for Prediction of Molecular Bioactivity for Drug Design, (2002).
Weston J Person, Chapelle O Person and Guyon I : Data cleaning algorithms with applications to micro-array experiments, Biowulf, (2001).
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Weston J Person, Perez-Cruz F , Bousquet O Person, Chapelle O Person, Elisseeff A Person and Schölkopf B Person: KDD Cup 2001 data analysis: prediction of molecular bioactivity for drug design -- Binding to Thrombin, BIOwulf, (2001).
Weston J Person, Elisseeff A Person and Schölkopf B Person: Use of the $ell_0$-norm with linear models and kernel methods, Biowulf Technologies, (2001).
Saunders C , Stitson MO , Weston J Person, Bottou L , Schölkopf B Person and Smola AJ : Support Vector Machine Reference Manual, CSD-TR-98-03, Department of Computer Science, Royal Holloway, University of London, (1998).

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